OMOP Clinical Terminology Mapper
Standardize Clinical Terminology with OMOP
Map clinical terms from various vocabularies to OMOP standard concepts for consistent healthcare data analysis.
Key Features
Concept Mapping
- Map source codes to standard concepts
- Multi-vocabulary support
- Relationship navigation
- Ancestor/descendant queries
- Equivalent concept finding
Vocabulary Support
- ICD-10-CM/PCS
- SNOMED CT
- LOINC
- RxNorm
- CPT/HCPCS
- NDC
- And 100+ vocabularies
Research Analytics
- Cohort definition support
- Drug era calculations
- Condition era mapping
- Measurement standardization
- Procedure classification
Data Quality
- Concept validation
- Mapping coverage analysis
- Domain assignment checking
- Invalid concept detection
Perfect For
- Clinical Researchers analyzing data
- Data Engineers building ETL pipelines
- Analysts standardizing terminology
- Health Systems implementing OMOP
Use Cases
- Clinical data standardization
- Research cohort building
- Drug utilization studies
- Outcome research
- Quality measure development
- Comparative effectiveness research
OHDSI Integration
- Compatible with OHDSI tools
- Atlas concept set support
- ACHILLES analysis support
- Data Quality Dashboard integration
Requirements
- OMOP Vocabulary database access
- Appropriate licensing for vocabularies
- Database connection credentials
Based on OMOP MCP from awesome-mcp-servers repository